The detailed information of tRNA gene sequence


Sequence ID>W1711293011
Genome IDLZYF01000143
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus [LZYF]
Start position on genome 5929
End posion on genome 6005
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtactgattt
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGTAGAGCGCCGCCTTCGGGAGGCGGATGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttgacaaaag
Secondary structure (Cloverleaf model)
>W1711293011	Pro	CGG
                   t      ACCA ttgacaaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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