The detailed information of tRNA gene sequence


Sequence ID>W1711293124
Genome IDLZYI01000014
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LZYI]
Start position on genome 15738
End posion on genome 15649
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttagactt
tRNA gene sequence 
GGAGCGTTGCCAGAGTGGTTGATTGGCACTGATTGGAAATCAGTTGGTCGGGAAACCGGC
ACGAAGGTTCGAACCCTTCACGCTCCGCCA
Downstream region at tRNA end position 
aaaacccctg
Secondary structure (Cloverleaf model)
>W1711293124	Ser	GGA
                   t      GCCA aaaacccctg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          C A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A A G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        C     TGGTCGGGAAACCGGCAC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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