The detailed information of tRNA gene sequence


Sequence ID>W131220710
Genome IDATZR01000180
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium SCGC AAA027-I19 [ATZR]
Start position on genome 33836
End posion on genome 33762
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgccggtaac
tRNA gene sequence 
GGCGGAGTAGCCAAGTGGGAAGGCATTGGTCTGCAAAACCGACATGAATGGGTTCGACTC
CCATCTCCGCCTCCA
Downstream region at tRNA end position 
gcaagtcctg
Secondary structure (Cloverleaf model)
>W131220710	Cys	GCA
                   c      TCCA gcaagtcctg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     T A C C C     A
        G A        A      | | | | |     G
      T     A C C G       A T G G G     C
      G       | | |                 T T
      G     A G G C
        G A        A     CATGA
                    T - A
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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