The detailed information of tRNA gene sequence


Sequence ID>W131221413
Genome IDAUAL01000017
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaploplasma axanthum ATCC 25176 [AUAL]
Start position on genome 3793
End posion on genome 3883
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatcttaat
tRNA gene sequence 
GGAGAAATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCTGTAAAAGG
CGCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
ttgaaaactt
Secondary structure (Cloverleaf model)
>W131221413	Ser	TGA
                   t      GCCA ttgaaaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCTGTAAAAGGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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