The detailed information of tRNA gene sequence


Sequence ID>W131221417
Genome IDAUAL01000017
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaploplasma axanthum ATCC 25176 [AUAL]
Start position on genome 46090
End posion on genome 46180
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgcctagtt
tRNA gene sequence 
GGAGTGATACTCAAGAGGCCGAAGAGGGCGCACTGCTAACGCGTTAGACCGGTAAAACGG
TGCGAGGGTTCGACTCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
ttggcccgtt
Secondary structure (Cloverleaf model)
>W131221417	Ser	GCT
                   t      GCCA ttggcccgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T C
                    T     C T C C C     A
      A G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      C G A        G     TAGACCGGTAAAACGGTGC
                    G + T
                    C - G
                    G - C
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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