The detailed information of tRNA gene sequence


Sequence ID>W131221808
Genome IDAUAU01000002
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGeothrix fermentans DSM 14018 [AUAU]
Start position on genome 114052
End posion on genome 114127
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cttccccatt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTCGGTTCGATC
CCGATTGGCTCCACCA
Downstream region at tRNA end position 
acaccgaagg
Secondary structure (Cloverleaf model)
>W131221808	Ala	GGC
                   t      ACCA acaccgaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T A G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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