The detailed information of tRNA gene sequence


Sequence ID>W131221811
Genome IDAUAU01000002
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGeothrix fermentans DSM 14018 [AUAU]
Start position on genome 179104
End posion on genome 179030
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaaacgcaa
tRNA gene sequence 
GGCGCCGTAGCCAAGTGGTAAGGCCCGGGACTGCAAATCCTGTATTCATCGGTTCGATTC
CGATCGGCGCCTCCA
Downstream region at tRNA end position 
gcaccagccc
Secondary structure (Cloverleaf model)
>W131221811	Cys	GCA
                   a      TCCA gcaccagccc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T A G C C     A
        G A        A      | | | | |     G
      T     A C C G       A T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        C     TATTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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