The detailed information of tRNA gene sequence


Sequence ID>W131221827
Genome IDAUAU01000009
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGeothrix fermentans DSM 14018 [AUAU]
Start position on genome 164549
End posion on genome 164639
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggagccacg
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCTGAAGGAGCACGATTGGAAATCGTGTAACGGTCAAAAGCCG
TTCGGGGGTTCGAATCCCCCACTCTCCGCCA
Downstream region at tRNA end position 
atgcgccccg
Secondary structure (Cloverleaf model)
>W131221827	Ser	GGA
                   g      GCCA atgcgccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAACGGTCAAAAGCCGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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