The detailed information of tRNA gene sequence


Sequence ID>W131222803
Genome IDAUBO01000022
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMegalodesulfovibrio gigas DSM 1382 = ATCC 19364 [AUBO]
Start position on genome 5987
End posion on genome 5898
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctccacagc
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTGACGGGGAGACCTGT
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
catagttgat
Secondary structure (Cloverleaf model)
>W131222803	Ser	TGA
                   c      GCCA catagttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGACGGGGAGACCTGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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