The detailed information of tRNA gene sequence


Sequence ID>W131224444
Genome IDAUCU01000027
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfatirhabdium butyrativorans DSM 18734 [AUCU]
Start position on genome 27625
End posion on genome 27718
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gacgcagcaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGATGGCGCCGCTCTCGAAAAGCGGTATCCTGTATAAAAGC
GGGATCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
catcgatatc
Secondary structure (Cloverleaf model)
>W131224444	Ser	CGA
                   a      GCCA catcgatatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    C       T G G C
      T G A        G     TATCCTGTATAAAAGCGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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