The detailed information of tRNA gene sequence


Sequence ID>W131224501
Genome IDAUCV01000060
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfogranum japonicum DSM 18378 [AUCV]
Start position on genome 2794
End posion on genome 2697
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attacatagt
tRNA gene sequence 
GGAAGTGGAAAGGGCACTGGTGGCTCTCCCGGACTTCAAATCCGGTGTGGCGGGTGAATA
GCTCGCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atttttgcct
Secondary structure (Cloverleaf model)
>W131224501	SeC(p)	TCA
                   t      GCCA atttttgcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | + | |                 T T
    G       C T C T
      T G G        C     TGTGGCGGGTGAATAGCTCGCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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