The detailed information of tRNA gene sequence


Sequence ID>W131224636
Genome IDAUCY01000022
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio cuneatus DSM 11391 [AUCY]
Start position on genome 29308
End posion on genome 29219
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acattcctgc
tRNA gene sequence 
GGAGGGATGGCAGAGTGGTTGATAGCGGCGGTCTTGAAAACCGTTGAGGGTGAGAGCCCT
CCGTGGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
tatttcaatc
Secondary structure (Cloverleaf model)
>W131224636	Ser	TGA
                   c      GCCA tatttcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G A C G       G T G G G     C
    G       +   | |                 T T
    T       T A G C
      T G A        G     TGAGGGTGAGAGCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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