The detailed information of tRNA gene sequence


Sequence ID>W131224793
Genome IDAUDB01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio hydrothermalis AM13 = DSM 14728 [AUDB]
Start position on genome 403292
End posion on genome 403386
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattaaatac
tRNA gene sequence 
GGAGAGGTGGCCGAGCACGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATAGGGCTTAAAA
CTCTATCCGGGGTTCAAATCCCCGCCTCTCCGCCA
Downstream region at tRNA end position 
cataaaagtt
Secondary structure (Cloverleaf model)
>W131224793	Ser	GCT
                   c      GCCA cataaaagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
    A C G A        G      | | | | |     A
  C         G C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TATAGGGCTTAAAACTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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