The detailed information of tRNA gene sequence


Sequence ID>W131224794
Genome IDAUDB01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio hydrothermalis AM13 = DSM 14728 [AUDB]
Start position on genome 404553
End posion on genome 404644
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcacgtttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGAACGCGGTAGTCTTGAAAACTATTGAAGGTGTGAGCC
TTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttacaataat
Secondary structure (Cloverleaf model)
>W131224794	Ser	TGA
                   t      GCCA ttacaataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGAAGGTGTGAGCCTTCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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