The detailed information of tRNA gene sequence


Sequence ID>W131224836
Genome IDAUDC01000008
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio zosterae DSM 11974 [AUDC]
Start position on genome 199459
End posion on genome 199548
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcacccaagc
tRNA gene sequence 
GGAGAGGTGTCCGAGTCCGGCTTAAGGAGCACGCCTGGAAAGCGTGTTTAGGTAACACTA
ACGGAGGTTCGAATCCTCTCCTCTCCGCCA
Downstream region at tRNA end position 
gaatgattat
Secondary structure (Cloverleaf model)
>W131224836	Ser	GGA
                   c      GCCA gaatgattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      + | | | |     G
  C         G C C T       G G A G G     C
  G           | | |                 T T
  G         A G G A
    C T T A        G     TTTAGGTAACACTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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