The detailed information of tRNA gene sequence


Sequence ID>W131224842
Genome IDAUDC01000008
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio zosterae DSM 11974 [AUDC]
Start position on genome 266297
End posion on genome 266204
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tctccgtaat
tRNA gene sequence 
GGAAGTGTATCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGGTTAACGCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
ttttacgctt
Secondary structure (Cloverleaf model)
>W131224842	SeC(p)	TCA
                   t      GCCA ttttacgctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGGTTAACGCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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