The detailed information of tRNA gene sequence


Sequence ID>W1711315301
Genome IDMAVV01000003
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio sp. N1 [MAVV]
Start position on genome 51223
End posion on genome 51313
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taattttatT
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGACGATTGGGGCGGTCTCGAAAACCGCTGTGGGTTTACACTCA
CCGAGGGTTCGAATCCCTCCCTCTCCGTCA
Downstream region at tRNA end position 
tccgataaat
Secondary structure (Cloverleaf model)
>W1711315301	Ser	CGA
                   T      GTCA tccgataaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTGGGTTTACACTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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