The detailed information of tRNA gene sequence


Sequence ID>W131225120
Genome IDAUDI01000003
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPseudoduganella violaceinigra DSM 15887 [AUDI]
Start position on genome 240446
End posion on genome 240371
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgaaagcag
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTAGAGCGGATCCCTTACAAGGATTAGGTCGGGAGTTCGAGC
CTCTCAGCGCCCACCA
Downstream region at tRNA end position 
ctcactgaag
Secondary structure (Cloverleaf model)
>W131225120	Val	TAC
                   g      ACCA ctcactgaag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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