The detailed information of tRNA gene sequence


Sequence ID>W1711315341
Genome IDMAVV01000061
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio sp. N1 [MAVV]
Start position on genome 5126
End posion on genome 5050
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaaagttaT
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGATAGCGCACCTGCCTTGGGAGCAGGGGGTCGGTGGTTCAA
ATCCACTCGCCCCGATtg
Downstream region at tRNA end position 
taaatattta
Secondary structure (Cloverleaf model)
>W1711315341	Pro	TGG
                   T      ATtg taaatattta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C A C C     A
    T C G A        A      + | | | |     A
  T         C G C G       G G T G G     C
  G         | | | |                 T T
  G         G C G C
    A T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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