The detailed information of tRNA gene sequence


Sequence ID>W131225575
Genome IDAUDR01000015
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 177280
End posion on genome 177207
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cggcgtctac
tRNA gene sequence 
GGCGCGGTGGCAGAGTGGTTATGCAGAGGACTGCAAATCCTTGGACGTCGGTTCGATTCC
GGCCCGCGCCTCCA
Downstream region at tRNA end position 
gaatttacgc
Secondary structure (Cloverleaf model)
>W131225575	Cys	GCA
                   c      TCCA gaatttacgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C G G C C     A
        G A        G      | + | | |     G
      T     G A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GGAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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