The detailed information of tRNA gene sequence


Sequence ID>W131225579
Genome IDAUDR01000016
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 72098
End posion on genome 72181
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttcttccgc
tRNA gene sequence 
GCCGGGATGGCGGAACAGGTAGACGCAGCGGACTCAAAATCCGCCGGTGGCAACACCGTG
AGGGTTCGACTCCCTCTCCCGGCAttc
Downstream region at tRNA end position 
tatcatcaga
Secondary structure (Cloverleaf model)
>W131225579	Leu	CAA
                   c      Attc tatcatcaga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C T C C C     A
      C A A        G      | | | | |     G
    A       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTGGCAACACCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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