The detailed information of tRNA gene sequence


Sequence ID>W131225584
Genome IDAUDR01000016
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 102570
End posion on genome 102494
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagactcgat
tRNA gene sequence 
GGTGAAGTAGCTCAGATGGTTAGAGCGACGGATTCATAACCCGTAGGTCGGCGGTTCGAC
TCCGCCCTTCACCACCA
Downstream region at tRNA end position 
tcaccccaaa
Secondary structure (Cloverleaf model)
>W131225584	Met	CAT
                   t      ACCA tcaccccaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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