The detailed information of tRNA gene sequence


Sequence ID>W131225585
Genome IDAUDR01000016
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 5313
End posion on genome 5238
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgctgta
tRNA gene sequence 
GGGCCCATAGCTCAACGGTTAGAGCAGCGGACTCATAATCCGTTGGTTGCTGGTTCGAAT
CCAGCTGGGCCCACCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>W131225585	Met	CAT
                   a      ACCA ataaaatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G A C C     A
      C A A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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