The detailed information of tRNA gene sequence


Sequence ID>W131225589
Genome IDAUDR01000019
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 73548
End posion on genome 73459
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcggcgtcc
tRNA gene sequence 
GGAGGCGTGGCCGAGCGGTTGAAGGCAGCGGTCTTGAAAACCGCCAGGGGTTCGCGCCCC
TCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
tttttcatca
Secondary structure (Cloverleaf model)
>W131225589	Ser	TGA
                   c      GCCA tttttcatca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CAGGGGTTCGCGCCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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