The detailed information of tRNA gene sequence


Sequence ID>W131225591
Genome IDAUDR01000019
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus margaritifer DSM 15129 [AUDR]
Start position on genome 34383
End posion on genome 34308
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcgctccat
tRNA gene sequence 
GCCGTTGTAGCTCAGCTGGTAGAGCAACTGATTCGTAATCAGTAGGTCGGGGGTTCGAAT
CCTCTCAACGGCACCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>W131225591	Thr	CGT
                   t      ACCA ataaaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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