The detailed information of tRNA gene sequence


Sequence ID>W1711317520
Genome IDMAXI01000336
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio sp. S3730MH75 [MAXI]
Start position on genome 14244
End posion on genome 14337
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttgagaac
tRNA gene sequence 
GGAAGTGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGGCTAACCCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
tattcactct
Secondary structure (Cloverleaf model)
>W1711317520	SeC(p)	TCA
                   c      GCCA tattcactct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGGCTAACCCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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