The detailed information of tRNA gene sequence


Sequence ID>W1711319043
Genome IDMAYW01000005
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 14229
End posion on genome 14305
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tttaattaat
tRNA gene sequence 
GCGCCCGTAGCTCAATTGGATAGAGTAGTGGACTTCGAATCCAACGGTTGCAGGTTCGAG
TCCTGCCGGGCGTGCCA
Downstream region at tRNA end position 
tgtgttcaat
Secondary structure (Cloverleaf model)
>W1711319043	Arg	TCG
                   t      GCCA tgtgttcaat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTT
                    G   A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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