The detailed information of tRNA gene sequence


Sequence ID>W1711319056
Genome IDMAYW01000050
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 5736
End posion on genome 5806
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tttagttcaa
tRNA gene sequence 
TGGGGTATAGTGTAACGGTAGCACGAGTGACTCTGGATCATTTAGTCCAGGTTCGAATCC
TGGTACCCCAGttt
Downstream region at tRNA end position 
gttttcaatg
Secondary structure (Cloverleaf model)
>W1711319056	Gln	CTG
                   a      Gttt gttttcaatg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G G T C C     A
        A A        A      | | | | |     G
      C     T G T G       C C A G G     C
      G     + | | |                 T T
      G     G C A C
        T A        G     TAGT
                    A - T
                    G + T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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