The detailed information of tRNA gene sequence


Sequence ID>W1711319060
Genome IDMAYW01000059
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 9460
End posion on genome 9368
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgccaatcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGTGGGTTGCTAACCCATTGTCCTGCTGATAGTG
GGACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
gctcataaaa
Secondary structure (Cloverleaf model)
>W1711319060	Ser	GCT
                   c      GCCA gctcataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C C G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGTCCTGCTGATAGTGGGACC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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