The detailed information of tRNA gene sequence


Sequence ID>W1711319061
Genome IDMAYW01000059
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 7262
End posion on genome 7187
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
attgagctaT
tRNA gene sequence 
GGGGACGTAGCTCAGCCTGGGAGAGCGTCCCGTTCGCATCGGGAAGGTCGGGGGTTCGAT
TCCCCTCGTCTCCATat
Downstream region at tRNA end position 
tatgtattta
Secondary structure (Cloverleaf model)
>W1711319061	Ala	CGC
                   T      ATat tatgtattta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C C C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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