The detailed information of tRNA gene sequence


Sequence ID>W1711319062
Genome IDMAYW01000071
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 3332
End posion on genome 3408
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctctttgt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCGGCGGAATCATAATCCGCGAGTCCGGGGTTCGAG
TCCCTGCACCGCTACCA
Downstream region at tRNA end position 
catctttaaa
Secondary structure (Cloverleaf model)
>W1711319062	Met	CAT
                   t      ACCA catctttaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GAGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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