The detailed information of tRNA gene sequence


Sequence ID>W1711319066
Genome IDMAYW01000144
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 10721
End posion on genome 10634
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgtcaaagt
tRNA gene sequence 
GGAGGGATGGCTGAGCGGTTGAAAGCGCTGGTCTCGAAAACCAGTTGAGGAGAAATCTTC
ACGCGAGTTCGAATCTCGCTCCCTCCGCtt
Downstream region at tRNA end position 
tgatatggga
Secondary structure (Cloverleaf model)
>W1711319066	Ser	CGA
                   t      GCtt tgatatggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G T C G       G C G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TTGAGGAGAAATCTTCAC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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