The detailed information of tRNA gene sequence


Sequence ID>W1711319071
Genome IDMAYW01000224
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 40
End posion on genome 112
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccccagccat
tRNA gene sequence 
GGCGCGTTCGTCTAGGGGTGAGGACGCTGGCCTCTCAAGCCGGTAACACGGGTTCGAATC
CCGTACGCGCTACac
Downstream region at tRNA end position 
cattggtgag
Secondary structure (Cloverleaf model)
>W1711319071	Glu	CTC
                   t      ACac cattggtgag
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      G A          G     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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