The detailed information of tRNA gene sequence


Sequence ID>W1711319073
Genome IDMAYW01000275
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 462
End posion on genome 539
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatagaaaga
tRNA gene sequence 
AGGTCTGTAGCTCTAATTGGCTAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCGA
ATCCCTCCAGACCTGCCA
Downstream region at tRNA end position 
taaatttgtt
Secondary structure (Cloverleaf model)
>W1711319073	Trp	CCA
                   a      GCCA taaatttgtt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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