The detailed information of tRNA gene sequence


Sequence ID>W1711319080
Genome IDMAYW01000402
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 1687
End posion on genome 1597
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcataaatct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTTTACGGTAACCCCGT
AACGCGGGTTCGAATCCCGCCCTCTCCGCTA
Downstream region at tRNA end position 
attgaaaccc
Secondary structure (Cloverleaf model)
>W1711319080	Ser	GGA
                   t      GCTA attgaaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TTTACGGTAACCCCGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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