The detailed information of tRNA gene sequence


Sequence ID>W131227878
Genome IDAUFN01000009
Search identical group
Phylum/ClassActinomycetota
SpeciesNocardioides alkalitolerans DSM 16699 [AUFN]
Start position on genome 495520
End posion on genome 495613
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggctgtcgg
tRNA gene sequence 
GGAGGCGTCGCCTAGTCCGGTCTATGGCGCCCGCCTGCTAAGCGGGTTTGGGGCTACAAC
CCCATCGAGGGTTCAAATCCCTCCGCCTCCGCCA
Downstream region at tRNA end position 
gcggaacccc
Secondary structure (Cloverleaf model)
>W131227878	Ser	GCT
                   g      GCCA gcggaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTGGGGCTACAACCCCATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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