The detailed information of tRNA gene sequence


Sequence ID>W131228377
Genome IDAUFW01000012
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaeta cellobiosiphila DSM 17781 [AUFW]
Start position on genome 23496
End posion on genome 23411
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctttgcttcT
tRNA gene sequence 
GCCAGCGTGGTGAAATTGGTAGACACGATAGACTCAAAATCTGTTGGGAGCAATCCCGTG
TCGGTTCGAGTCCGACCGCTGGTATaa
Downstream region at tRNA end position 
agctgttcag
Secondary structure (Cloverleaf model)
>W131228377	Leu	CAA
                   T      ATaa agctgttcag
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGGAGCAATCCCGT
                    A - T
                    T + G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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