The detailed information of tRNA gene sequence


Sequence ID>W131228382
Genome IDAUFW01000021
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaeta cellobiosiphila DSM 17781 [AUFW]
Start position on genome 15950
End posion on genome 15864
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gataattaaT
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGGCGGTCTTGAAAACCGTTGTGCAGTGATGTACC
GTGGGTTCGAATCCCACCTTCTCCGTtt
Downstream region at tRNA end position 
ttaattatct
Secondary structure (Cloverleaf model)
>W131228382	Ser	TGA
                   T      GTtt ttaattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGTGCAGTGATGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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