The detailed information of tRNA gene sequence


Sequence ID>W1711335828
Genome IDMBRE01000044
Search identical group
Phylum/ClassCyanobacteriota
SpeciesOscillatoriales cyanobacterium USR001 [MBRE]
Start position on genome 58286
End posion on genome 58201
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtccaaat
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGATGGCATCTGTTTGCTAAACAGAATTGGGTAAAACCAAC
GCAGGTTCAAATCCTGTTCTCTCCGCtt
Downstream region at tRNA end position 
ttcccctggt
Secondary structure (Cloverleaf model)
>W1711335828	Ser	GCT
                   t      GCtt ttcccctggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G T C C     A
      A G A        G      + | | | |     A
    G       G C C G       G C A G G     C
    G       + | | |                 T T
    C       T G G C
      T G A        A     ATTGGGTAAAACCAAC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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