The detailed information of tRNA gene sequence


Sequence ID>W131231781
Genome IDAUIS01000017
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesThermithiobacillus tepidarius DSM 3134 [AUIS]
Start position on genome 48088
End posion on genome 48178
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accaaagcac
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGATTGCGGCGGTCTTGAAAACCGTTGACGGCTGATACCCG
TCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
acccaggcat
Secondary structure (Cloverleaf model)
>W131231781	Ser	TGA
                   c      GCCA acccaggcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        G     TGACGGCTGATACCCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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