The detailed information of tRNA gene sequence


Sequence ID>W131231789
Genome IDAUIS01000030
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesThermithiobacillus tepidarius DSM 3134 [AUIS]
Start position on genome 25462
End posion on genome 25536
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgcctcctc
tRNA gene sequence 
GGGTGGTTAGCTCAGCGGGAGAGCATTGCCTTCACACGGCAAGGGTCGCAGGTTCGATCC
CTGCACCACCCACCA
Downstream region at tRNA end position 
attccccgtt
Secondary structure (Cloverleaf model)
>W131231789	Val	CAC
                   c      ACCA attccccgtt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          C T
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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