The detailed information of tRNA gene sequence


Sequence ID>W131231790
Genome IDAUIS01000033
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesThermithiobacillus tepidarius DSM 3134 [AUIS]
Start position on genome 19342
End posion on genome 19433
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgtcggaca
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGCGCCGACTCGAAATCGGATGGGGGTTAACAGCC
CCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
catcccattt
Secondary structure (Cloverleaf model)
>W131231790	Ser	CGA
                   a      GCCA catcccattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGGGGTTAACAGCCCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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