The detailed information of tRNA gene sequence


Sequence ID>W131231828
Genome IDAUIT01000023
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfobacterium hveragerdense DSM 12571 [AUIT]
Start position on genome 26029
End posion on genome 25938
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttagtgatT
tRNA gene sequence 
GGAGGAGTGCCCGAGTGGACGAAGGGGGCGGCCTTGAAAGCCGTTGAGGGAGTTCACCTC
CCTCCGGGGGTTCGAATCCCTCCTCCTCCGTtt
Downstream region at tRNA end position 
ataaaacccc
Secondary structure (Cloverleaf model)
>W131231828	Ser	TGA
                   T      GTtt ataaaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    A       A G G G
      C G A        G     TGAGGGAGTTCACCTCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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