The detailed information of tRNA gene sequence


Sequence ID>W131231872
Genome IDAUIU01000013
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 181777
End posion on genome 181690
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataagaaatt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTTAAGGCGGCGGTCTTGAAAACCGCTGTAGGGTATCTCCTA
CCGGGGGTTCAAATCCCTCCCCCTCCGCtg
Downstream region at tRNA end position 
tctattccat
Secondary structure (Cloverleaf model)
>W131231872	Ser	TGA
                   t      GCtg tctattccat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTAGGGTATCTCCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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