The detailed information of tRNA gene sequence


Sequence ID>W131231880
Genome IDAUIU01000016
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 87991
End posion on genome 87904
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tattataact
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGACGAATGGGGCGGTCTCGAAAACCGCTGTGGTGTAGACCACC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atttttactt
Secondary structure (Cloverleaf model)
>W131231880	Ser	CGA
                   t      GCCA atttttactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGTGTAGACCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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