The detailed information of tRNA gene sequence


Sequence ID>W1711351569
Genome IDMDCO01000012
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hampsonii [MDCO]
Start position on genome 625911
End posion on genome 625838
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tattaattaa
tRNA gene sequence 
GGGGATATAGCTCAGTTTGGGAGAGCATCACAATGGCATTGTGAGGGTCGTGGGTTCGAG
CCCCATTATCTCCAatt
Downstream region at tRNA end position 
tttgaattat
Secondary structure (Cloverleaf model)
>W1711351569	Ala	GGC
                   a      Aatt tttgaattat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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