The detailed information of tRNA gene sequence


Sequence ID>W131234799
Genome IDAULB01000025
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomadura rifamycini DSM 43936 [AULB]
Start position on genome 22092
End posion on genome 22177
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctgtcctgc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTAGGGCGCACGCTTGGAAAGCGTGTTGGGTTCACGCCCTC
GCGAGTTCGAATCTCGCATCCTCCGCtc
Downstream region at tRNA end position 
gcccttcggg
Secondary structure (Cloverleaf model)
>W131234799	Ser	GGA
                   c      GCtc gcccttcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T C C G       G C G A G     C
    G       + | | |                 T T
    C       G G G C
      C T A        G     TTGGGTTCACGCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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