The detailed information of tRNA gene sequence


Sequence ID>W131236086
Genome IDAUMA01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio aminophilus DSM 12254 [AUMA]
Start position on genome 370374
End posion on genome 370282
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggaatcaat
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCGTGGGCTTCAAACCCATTGCGAGACTCATCCTC
TCGGGCAGGTTCGACTCCTGTACGCTTCCGCCA
Downstream region at tRNA end position 
ctccgccgac
Secondary structure (Cloverleaf model)
>W131236086	SeC	TCA
                   t      GCCA ctccgccgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T G T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGCGAGACTCATCCTCTCGG
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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