The detailed information of tRNA gene sequence


Sequence ID>W131236112
Genome IDAUMA01000010
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio aminophilus DSM 12254 [AUMA]
Start position on genome 153839
End posion on genome 153745
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggacgaccc
tRNA gene sequence 
GGAGAGGTGGCCGAGCATGGCTGAAGGCGCTCGCCTGCTAAGCGGGTATACTGGCAAAAC
CGGTATCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacaacgatt
Secondary structure (Cloverleaf model)
>W131236112	Ser	GCT
                   c      GCCA gacaacgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    A C G A        G      | | | | |     A
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TATACTGGCAAAACCGGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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