The detailed information of tRNA gene sequence


Sequence ID>W131237119
Genome IDAUMV01000019
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 60335
End posion on genome 60259
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccaccccga
tRNA gene sequence 
GGCGACGTAGGGAAGTGGCTCAACCCGCACCTCTGCAAAAGGTGTTGTCGGCAGTTCGAA
TCTGCTCGTCGCCTCCA
Downstream region at tRNA end position 
atctggcctc
Secondary structure (Cloverleaf model)
>W131237119	Cys	GCA
                   a      TCCA atctggcctc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C G T C     A
      T G A        A      + | | | |     G
    G       A G G G       G G C A G     C
    G         | | |                 T T
    C       A C C C
      T C A        G     TTGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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